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Hemoglobin oxygen binding. Hemoglobin is a symmetrical tetrameric protein with 4 oxygen bin ...
Hemoglobin oxygen binding. Hemoglobin is a symmetrical tetrameric protein with 4 oxygen binding sites (see figure 1) that exhibits a highly cooperative binding curve. Figure 1: Schematic figure of a hemoglobin protein, with the oxygen binding sites (called heme) in red and binding oxygens in light blue When one oxygen binds to one of these four sites, a local deformation occurs that lowers the energy of the second binding site. Taking this into account, we can make a model with the following assumptions: - A hemoglobin molecule with no oxygen bound has an energy of zero. - A hemoglobin molecule has an energy ?<0 if only one oxygen is bound to any of the four binding sites. - When any two sites are occupied the energy is now J<2?<0. - Similarly, when any three sites are occupied, the energy is K<23?J<3?<0, and is L<34?K<2J<4?<0 when all four sites are occupied. Suppose we have an ensemble of N hemoglobin proteins:
(b) [3] Assume oxygen in the air behaves as an ideal gas. Express the chemical potential of the oxygen gas as a function of pressure. You can do this by using any ensemble. (c) [3] Obtain an expression for the binding curve: the average fraction of hemoglobin sites bound to oxygen, as a function of the oxygen pressure. Plot the binding curve and compare it with the case of no cooperativity (J=2?,K=3?, and L=4?, with ?<0 ), and to the case of total cooperativity (L<0, and K=J=?=+?).